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Mission Bay Hotels, San Francisco

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4779 Cheap Hotels in Mission Bay - Specials, Reviews, & Last Minute Deals

LUMA Hotel San Francisco

4.0 star property
Mission Bay
9.6 out of 10, Exceptional, (2331)
"Our room was clean and comfortable, and the staff was friendly and quite helpful. "
United States
Shelly
The price is NZ$408
includes taxes & fees
14 Nov - 15 Nov
LUMA Hotel San Francisco

Inn at Rockaway San Francisco Pacifica

2.5 star property
20.2 km from Mission Bay
8.2 out of 10, Very good, (1001)
"Beautiful location"
United States
Elena
The price is NZ$221
includes taxes & fees
11 Nov - 12 Nov
Inn at Rockaway San Francisco Pacifica

Four Points by Sheraton San Rafael Marin County

3.0 star property
29.7 km from Mission Bay
8.6 out of 10, Excellent, (1239)
"Great place and helpful, frendly staff"
United States
Sarah
The price is NZ$235
includes taxes & fees
30 Nov - 1 Dec
Four Points by Sheraton San Rafael Marin County

The Evergreen

2.0 star property
20.3 km from Mission Bay
9.2 out of 10, Wonderful, (325)
"Great place."
United States
Tom
The price is NZ$223
includes taxes & fees
9 Nov - 10 Nov
The Evergreen

DoubleTree by Hilton Hotel Berkeley Marina

4.0 star property
12.9 km from Mission Bay
8.2 out of 10, Very good, (3674)
"We loved our stay at this hotel!"
United States
Mollie
The price is NZ$285
includes taxes & fees
23 Nov - 24 Nov
DoubleTree by Hilton Hotel Berkeley Marina

Holiday Inn Express and Suites Fisherman's Wharf by IHG

3.0 star property
Fisherman's Wharf, 4.5 km from Mission Bay
9.2 out of 10, Wonderful, (2175)
"The stay was enjoyable and comfortable."
United States
Yanele
The price is NZ$342
includes taxes & fees
9 Dec - 10 Dec
Holiday Inn Express and Suites Fisherman's Wharf by IHG

The Lodge at Tiburon

3.5 star property
12.9 km from Mission Bay
8.8 out of 10, Excellent, (1002)
"We enjoyed our stay "
United States
Xiaoyu
The price is NZ$412
includes taxes & fees
7 Dec - 8 Dec
The Lodge at Tiburon

DoubleTree by Hilton San Francisco South Airport Blvd

4.0 star property
13.8 km from Mission Bay
8.4 out of 10, Very good, (1984)
"Clean room , friendly staff"
United States
AMOY
The price is NZ$241
includes taxes & fees
22 Nov - 23 Nov
DoubleTree by Hilton San Francisco South Airport Blvd

Marin Suites Hotel

3.0 star property
21.2 km from Mission Bay
8.4 out of 10, Very good, (1004)
"Great location and good value for the money "
United States
Vincent
The price is NZ$215
includes taxes & fees
30 Nov - 1 Dec
Marin Suites Hotel

La Quinta Inn & Suites by Wyndham San Francisco Airport N

3.0 star property
13.5 km from Mission Bay
8.0 out of 10, Very good, (2053)
"Hotel was good for the price. "
United States
Dominique
The price is NZ$211
includes taxes & fees
26 Nov - 27 Nov
La Quinta Inn & Suites by Wyndham San Francisco Airport N

Best Western Corte Madera Inn

2.5 star property
20.8 km from Mission Bay
9.0 out of 10, Wonderful, (1001)
"Location, very friendly, helpful staff"
United States
Judy
The price is NZ$278
includes taxes & fees
10 Nov - 11 Nov
Best Western Corte Madera Inn

The Marina Inn on San Francisco Bay

2.5 star property
19.6 km from Mission Bay
8.6 out of 10, Excellent, (2209)
"Great place to stay!"
United States
Dixon
The Marina Inn on San Francisco Bay

Holiday Inn Golden Gateway by IHG

3.5 star property
Nob Hill, 3.4 km from Mission Bay
9.0 out of 10, Wonderful, (4775)
"Great views and central location loved it"
United States
Melissa
The price is NZ$248
includes taxes & fees
23 Nov - 24 Nov
Holiday Inn Golden Gateway by IHG

HYATT house Emeryville/San Francisco Bay Area

3.0 star property
11.5 km from Mission Bay
9.2 out of 10, Wonderful, (1150)
"Check in was great and the staff was helpful and courteous. "
United States
Geraldine
The price is NZ$287
includes taxes & fees
4 Dec - 5 Dec
HYATT house Emeryville/San Francisco Bay Area

Hotel Shattuck Plaza

4.0 star property
15.4 km from Mission Bay
8.8 out of 10, Excellent, (1049)
"Friendly staff, accommodations lovely. Caring crew. "
United States
Kathleen
The price is NZ$461
includes taxes & fees
15 Nov - 16 Nov
Hotel Shattuck Plaza

Hilton Garden Inn San Francisco Arpt North

3.0 star property
12.6 km from Mission Bay
8.4 out of 10, Very good, (1000)
"loved our stay here, very clean, had dining options within the hotel, safe location. great place to stay!"
United States
Sukhmanjit
The price is NZ$190
includes taxes & fees
15 Nov - 16 Nov
Hilton Garden Inn San Francisco Arpt North

Hyatt Centric Fisherman's Wharf San Francisco

4.0 star property
Fisherman's Wharf, 4.5 km from Mission Bay
8.6 out of 10, Excellent, (1467)
"Great place to stay."
United States
Christina
The price is NZ$319
includes taxes & fees
23 Nov - 24 Nov
Hyatt Centric Fisherman's Wharf San Francisco

Hotel Riu Plaza Fisherman's Wharf

4.0 star property
Fisherman's Wharf, 4.5 km from Mission Bay
9.0 out of 10, Wonderful, (7040)
"Room was clean and spacious, massive bed, breakfast was very good, perfect location! "
United Kingdom
miss h
The price is NZ$302
includes taxes & fees
30 Nov - 1 Dec
Hotel Riu Plaza Fisherman's Wharf

FOUND Hotel Carlton, Nob Hill

2.0 star property
3 km from Mission Bay
8.6 out of 10, Excellent, (1014)
"Everything was perfect and such a great location"
Australia
Jodie
The price is NZ$127
includes taxes & fees
24 Nov - 25 Nov
FOUND Hotel Carlton, Nob Hill

Hotel Caza Fisherman's Wharf

4.0 star property
Fisherman's Wharf, 4.6 km from Mission Bay
9.0 out of 10, Wonderful, (3820)
"Great place to stay"
United States
Joseph
The price is NZ$327
includes taxes & fees
7 Dec - 8 Dec
Hotel Caza Fisherman's Wharf
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Our guide on where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Union Square

Fashion puts its best foot forward in one of America’s largest shopping plazas.

Downtown San Francisco

Known for its fascinating museums, popular shops and acclaimed art galleries, there's plenty to explore in Downtown San Francisco. Top attractions like Oracle Park and Chase Center are major draws. Catch the metro at Market St & 5th St Stop or Market St & Taylor St Stop to see more of the city.

Fisherman's Wharf

Taste some of the city’s freshest sea food and catch some fabulous views in this waterfront neighbourhood dating back to the time of the gold rush.

South of Market

From baseball games to top-notch art exhibits, find endless entertainment in one of San Francisco’s fastest-growing neighborhoods.

Nob Hill

Examine architecturally significant buildings, visit the Cable Car Museum and enjoy magnificent views of greater San Francisco in this affluent district.

Top Mission Bay Hotel Reviews

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Frequently asked questions

What is Mission Bay like?
Travellers will be sure to enjoy their time in San Francisco's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Chase Center while you're in the neighbourhood.
Where is the best place to stay in Mission Bay?
Based on Expedia customer reviews, LUMA Hotel San Francisco is the highest ranked property in Mission Bay. This hotel is a short 5-minute walk from Oracle Park, and it offers a restaurant and a fitness centre.
How many hotels will I be able to find in Mission Bay?
When you want to put your feet up after a day of exploring the sights in San Francisco, you can choose from 18 Expedia hotels and other accommodation options in Mission Bay.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes! The majority of hotel bookings are fully refundable provided that you cancel prior to the accommodation's cancellation deadline, which often is within 24-48 hours of your check-in date. If you have a non-refundable reservation, it might still be possible to cancel it and be given a refund within 24 hours of booking. Put your dates in and click on "Search", then you can filter by "fully refundable" to review the best deals available in Mission Bay.
What are the top things to see and do in Mission Bay?
Chase Center, Lefty O'Doul Bridge and Lucky Strike San Francisco are just a few attractions to check out in Mission Bay. While you're out sightseeing, Pier 39 and Oracle Park are a couple of additional sights to visit in San Francisco.
How can I get around Mission Bay and the greater San Francisco area?
For a quick way to explore the city, catch a ride on metro transit at UCSF/Chase Center Stop, Mission Rock Station or UCSF Mission Bay Stop. To venture out of town, take a train from San Francisco Station.