A busy urban street at night with illuminated billboards and a prominent Epson sign.

Boutique Hotels & Resorts in Shinjuku from NZ$176

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check availability on Shinjuku Boutique Hotels

Next weekend
In two weeks

Our top choices for Shinjuku boutique hotels

Palace Hotel Tokyo

Palace Hotel Tokyo
5.0 star property
Chiyoda
9.8 out of 10, Exceptional, (1,003 reviews)
"Great hotel, great location, super helpful staff, and wonderful places to eat."
United Kingdom
Jaclyn
The price is NZ$1,186
20 July - 21 July
Palace Hotel Tokyo

The Capitol Hotel Tokyu

The Capitol Hotel Tokyu
5.0 star property
Chiyoda
9.8 out of 10, Exceptional, (1,001 reviews)
"One of the best hotels in the world."
United States
Thomas
The price is NZ$1,050
4 Aug - 5 Aug
The Capitol Hotel Tokyu

Hotel Chinzanso Tokyo

Hotel Chinzanso Tokyo
5.0 star property
Bunkyo
9.8 out of 10, Exceptional, (1,113 reviews)
"Great classic hotel with a wonderful service, a beautiful garden and a pagoda."
United States
RAFAEL
The price is NZ$493
6 July - 7 July
Hotel Chinzanso Tokyo

The Tokyo Station Hotel

The Tokyo Station Hotel
4.5 star property
Chiyoda
9.8 out of 10, Exceptional, (1,001 reviews)
"Excellent location and great staff. Hotel is very clean and the breakfast in the Atrium is the best!"
United States
Jia
The price is NZ$857
15 July - 16 July
The Tokyo Station Hotel

Shangri-La Tokyo

Shangri-La Tokyo
5.0 star property
Chiyoda
9.6 out of 10, Exceptional, (625 reviews)
"Exceptional hotel. Highly recommend"
United States
Maureen
The price is NZ$1,281
2 Aug - 3 Aug
Shangri-La Tokyo

The Peninsula Tokyo

The Peninsula Tokyo
5.0 star property
Chiyoda
9.4 out of 10, Exceptional, (1,002 reviews)
"The staff were very kind and incredibly helpful!"
United States
Theyazan
The price is NZ$1,432
24 July - 25 July
The Peninsula Tokyo

Solaria Nishitetsu Hotel Ginza

Solaria Nishitetsu Hotel Ginza
3.5 star property
Ginza
9.0 out of 10, Wonderful, (1,001 reviews)
"Very clean and the perfect area, would stay again!"
Canada
Corbin
The price is NZ$336
4 Aug - 5 Aug
Solaria Nishitetsu Hotel Ginza

The Gate Hotel Kaminarimon by Hulic

The Gate Hotel Kaminarimon by Hulic
4.0 star property
Taito
9.4 out of 10, Exceptional, (1,003 reviews)
"Our favorite place to stay in Japan."
United States
Sean patrick
The price is NZ$176
7 July - 8 July
The Gate Hotel Kaminarimon by Hulic
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Shinjuku Hotel Reviews

Frequently asked questions

What's there to see and do in Shinjuku?
The bars, shopping and sightseeing are just some of the things to enjoy while you're in the area. Top activities and sights around Shinjuku include Shibuya Crossing, Tokyo Dome and Tokyo Tower. You might also want to see interesting spots such as Tokyo Skytree, Tokyo Disneyland® and Tokyo DisneySea® during your trip.
What's the best way to get to my boutique hotel in Shinjuku?
You have a few options for travelling to and around Shinjuku. The closest major airport is Tokyo (HND-Haneda), which is located 11 mi (17.7 km) away. You can walk to nearby metro stations including Shinjuku-sanchome Station, Shinjuku-nishiguchi Station and Higashi-shinjuku Station.

Explore a world of travel with Expedia