A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

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Our top choices for San Juan Island hotels

The Orca Inn

The Orca Inn
2.0 star property
Friday Harbor
8.2 out of 10, Very good, (27 reviews)
"Everything was awesome clean small but that’s what I expected and very nice staff"
United States
Ashley
The price is NZ$245
includes taxes & fees
8 July - 9 July
The Orca Inn

Discovery Inn

Discovery Inn
2.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (16 reviews)
"Excellent front desk, very helpful."
United States
Thomas
The price is NZ$512
includes taxes & fees
6 July - 7 July
Discovery Inn

Trumpeter Inn

Trumpeter Inn
3.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (262 reviews)
"This was our first experience at a bed & breakfast, and it was a great one! We would book again."
United States
Rene
The price is NZ$635
includes taxes & fees
1 July - 2 July
Trumpeter Inn

Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (374 reviews)
"Very nice and helpful staff! I love the location of this hotel it is so convenient. "
United States
XIN
The price is NZ$323
includes taxes & fees
21 July - 22 July
Bird Rock Hotel

Friday Harbor Suites

Friday Harbor Suites
2.5 star property
Friday Harbor
8.6 out of 10, Excellent, (1,000 reviews)
"Conveniently located, spacious rooms, good facilities make this hotel a better option to stay in Friday Harbor."
United States
paresh
The price is NZ$477
includes taxes & fees
7 July - 8 July
Friday Harbor Suites

Snug Harbor Resort

Snug Harbor Resort
2.5 star property
Friday Harbor
9.8 out of 10, Exceptional, (524 reviews)
"Serene and cozy resort."
United States
Toshimasa
The price is NZ$907
includes taxes & fees
1 July - 2 July
Snug Harbor Resort

Earthbox Inn & Spa

Earthbox Inn & Spa
3.0 star property
Friday Harbor
8.8 out of 10, Excellent, (1,001 reviews)
"Clean, nice staff , excellent location"
United States
Karen
The price is NZ$578
includes taxes & fees
26 July - 27 July
Earthbox Inn & Spa

Saturn's Return

Saturn's Return
2.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (27 reviews)
"Great place to stay in San Juan island. Very quiet and tranquil, and the breakfast was amazing. "
United States
Stanyslav
The price is NZ$682
includes taxes & fees
1 July - 2 July
Saturn's Return

Tucker House Inn

Tucker House Inn
4.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (291 reviews)
"Beautiful property, wonderful staff, excellent amenities and service. Proximity to downtown and SJI brewery and ferry was big bonus. Many thx for a wonderful stay."
United States
Kao Bin
The price is NZ$575
includes taxes & fees
2 July - 3 July
Tucker House Inn

Friday Harbor Grand B&B

Friday Harbor Grand B&B
3.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (141 reviews)
"This place is class on every level…from the room cleanliness, to fresh baked cookies in the evening, to the delicious breakfast, to the informative host. But what sets it above all others is the evening’s piano event which should not be missed. We had a 3 night stay and we hope to return."
United States
Karen
The price is NZ$717
includes taxes & fees
6 July - 7 July
Friday Harbor Grand B&B

Friday Harbor House

Friday Harbor House
3.5 star property
Friday Harbor
9.6 out of 10, Exceptional, (275 reviews)
"The hotel was lovely with a beautiful view of the harbor."
United States
Lisa
The price is NZ$1,349
includes taxes & fees
26 July - 27 July
Friday Harbor House

Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
3.0 star property
Anacortes
9.0 out of 10, Wonderful, (1,024 reviews)
"Beautiful location, great staff."
United States
Julinda
The price is NZ$316
includes taxes & fees
8 July - 9 July
Anacortes Ship Harbor Inn

The Marina Inn

The Marina Inn
2.5 star property
Anacortes
9.6 out of 10, Exceptional, (1,015 reviews)
"The staff and accommodation is fantastic."
Canada
Farjam
The price is NZ$298
includes taxes & fees
1 July - 2 July
The Marina Inn

Nantucket Inn

Nantucket Inn
3.5 star property
Anacortes
9.8 out of 10, Exceptional, (555 reviews)
"The breakfast served each morning is phenomenal.The owner makes the breakfast and everything right down to the pastries are made from scratch .The owner is so nice and very helpful as to to what to do and see in Anacortes !"
Canada
Kathryn
The price is NZ$390
includes taxes & fees
1 July - 2 July
Nantucket Inn

Salish Inn

Salish Inn
2.5 star property
Anacortes
8.4 out of 10, Very good, (669 reviews)
"Very clean rooms and great breakfast."
United States
SukYoung
The price is NZ$299
includes taxes & fees
2 July - 3 July
Salish Inn

San Juan Motel

San Juan Motel
2.0 star property
Anacortes
8.0 out of 10, Very good, (625 reviews)
"It was clean and the location was close to everything we needed"
United States
Karen
The price is NZ$147
includes taxes & fees
1 July - 2 July
San Juan Motel

Deer Harbor Inn

Deer Harbor Inn
3.0 star property
Deer Harbor
8.4 out of 10, Very good, (209 reviews)
"Very quiet and uncrowded. Matthew's BBQ/SMOKE HOUSE restaurant and the music were great šŸ‘"
United States
Theodore
The price is NZ$560
includes taxes & fees
5 July - 6 July
Deer Harbor Inn

Coachman Inn & Suites

Coachman Inn & Suites
2.5 star property
Oak Harbor
9.2 out of 10, Wonderful, (1,004 reviews)
"Great place to stay"
United States
Carol
The price is NZ$323
includes taxes & fees
12 July - 13 July
Coachman Inn & Suites

Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
3.5 star property
Eastsound
10.0 out of 10, Exceptional, (173 reviews)
"Jill and Charles were the BEST hosts!! The breakfast was fabulous! the property is beautiful and so quiet! Rooms are cozy and comfy!! They were so helpful and were so kind to us as we had to check out early and had our breakfast ready! Great place and we will be back...!!!"
United States
Angela
The price is NZ$551
includes taxes & fees
25 July - 26 July
Kangaroo House B&B on Orcas Island

Outlook Inn

Outlook Inn
3.0 star property
Eastsound
9.2 out of 10, Wonderful, (516 reviews)
"Beautiful, clean room with great view of the sound and all East Sound restaurants, bars and Crescent each within walking distance."
United States
Brian
The price is NZ$849
includes taxes & fees
8 July - 9 July
Outlook Inn
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Stay near popular San Juan Island attractions

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

A marina with numerous boats docked, a wooden pier, and a forested hill in the background.

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