Close to Waterfront Park and B Street Cruise Ship Terminal, Motel 6 San Diego Airport - Harbor provides amenities such as laundry facilities. Stay connected with free in-room WiFi.
Located in Downtown San Diego, a neighbourhood in San Diego, Motel 6 San Diego Airport - Harbor is near the airport and near the beach. Seaport Village and Fashion Valley Mall are worth checking out if shopping is on the agenda, while those wishing to experience the area's natural beauty can explore Balboa Park and Old Town San Diego State Park. Check out an event or a game at Petco Park, and consider making time for San Diego Zoo, a top attraction not to be missed. Visit our San Diego travel guide
Close to Waterfront Park and B Street Cruise Ship Terminal, Motel 6 San Diego Airport - Harbor provides amenities such as laundry facilities. Stay connected with free in-room WiFi.
Other perks include:
An outdoor pool
Free self-parking
A vending machine and a 24-hour front desk
Guest reviews speak highly of the helpful staff
Room features
All 69 rooms boast comforts such as air conditioning, in addition to amenities such as free WiFi.
If you have requests for specific accessibility needs, please contact the property using the information on the reservation confirmation received after booking.
Front entrance ramp
No lift
Pool hoist on site
Wheelchair accessible (may have limitations)
Wheelchair-accessible pool
Wheelchair-accessible van parking
More
Designated smoking areas
Room amenities
Bedroom
Bedsheets provided
Blackout drapes
Bathroom
Hair dryer (on request)
Private bathroom
Rainfall showerhead
Shower
Toothbrush and toothpaste (on request)
Towels provided
Entertainment
TV with cable channels
Food and drink
Refrigerator
More
Air conditioning
Desk
Free local calls
Phone
Policies
Check-in
Check-in start time: 3:00 PM; check-in end time: 1 AM
Late check-in subject to availability
Minimum check-in age - 18
Check-out
Check-out before 11 AM
Special check-in instructions
An adult aged 18 or older must assume all liability for the booking
Front desk staff will greet guests on arrival at the property
The credit card used to book the reservation must be presented by the cardholder at check-in along with matching photo identification, and other arrangements must be coordinated with the property prior to arrival
Information provided by the property may be translated using automated translation tools
Access methods
Staffed front desk
Pets
Pets stay for free
Service animals are welcome, and are exempt from fees
2 total pets
Restrictions apply; for more information contact the property on the number on the booking confirmation
Children and extra beds
Children are welcome
3 children, up to the age of 17 years, can stay for free if using existing beds when occupying the parent or guardian's room
Rollaway/extra beds are not available.
Cots (infant beds) are not available
Payment types
Important information
Fees
You'll be asked to pay the following charges at the property. Fees may include applicable taxes:
Deposit: USD 60.00 per accommodation, per stay
We have included all charges provided to us by the property.
You need to know
Extra-person charges may apply and vary depending on property policy
Government-issued photo identification and a credit card may be required at check-in for incidental charges
Special requests are subject to availability upon check-in and may incur additional charges; special requests cannot be guaranteed
This property accepts credit cards, mobile payments and cash
Mobile payment options include: Google Pay, Apple Pay and PayPal
Cashless transactions are available
Safety features at this property include a fire extinguisher, a smoke detector and window guards
This property affirms that it follows the cleaning and disinfection practices of Clean@6 (Motel 6)
We should mention
This property does not have any lifts
Frequently asked questions
Does Motel 6 San Diego Airport - Harbor have a pool?
Yes, this property has an outdoor pool.
How much does it cost to stay at Motel 6 San Diego Airport - Harbor?
As of 18 Sept 2026, prices found for a 1-night stay for 2 adults at Motel 6 San Diego Airport - Harbor on 29 Sept 2026 start from NZ$154, including taxes and fees. This price is based on the lowest nightly price found in the last 24 hours for stays in the next 30 days. Prices are subject to change. Choose your dates for more accurate prices.
Is Motel 6 San Diego Airport - Harbor pet-friendly?
Yes, Motel 6 San Diego Airport - Harbor allows pets (limit 2 total). Some restrictions may apply, so please contact the property for more details.
How much is parking at Motel 6 San Diego Airport - Harbor?
Self-parking is free at this property.
What time is check-in at Motel 6 San Diego Airport - Harbor?
Check-in start time: 3:00 PM; check-in end time: 1 AM. Late check-in is available during limited hours.
What time is check-out at Motel 6 San Diego Airport - Harbor?
Checkout is at 11 AM.
Where is Motel 6 San Diego Airport - Harbor located?
Located in Downtown San Diego, this motel is within a 10-minute walk of Waterfront Park and San Diego Bay. Port of San Diego and Balboa Park are also within 1 mile (2 km). County Center - Little Italy Station is 11 minutes by foot and Middletown Station is 14 minutes.
Can I cancel my reservation for free and receive a full refund?
Yes, this property offers free cancellation on selected room rates because flexibility matters! Please refer to the property cancellation policy on our site for more details about any exclusions or requirements.
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Reviews
Motel 6 San Diego Airport - Harbor Reviews
7.6
Good
All reviews shown are from real guest experiences. Only travellers who have booked a stay with us can submit a review. We verify reviews according to our guidelines and publish all reviews, positive or negative.More informationOpens in a new window
This was one of the best motel 6 I've stayed at. The staff were super nice and helpful and the room was clean and well maintained. Id Def stay there again. It was in a very nice area everything was super convenient.
My room didn’t have any shampoo or body wash like the other room I booked for my parents and the pillows weren’t great but nothing to cause concern. Staff was great and parking was easy.
Property and street had construction which was obtrusive. Parking was tight. Room was clean n ready. Staff was helpful but not overly. Overall a good stay.
The staff was nice, location convenient, cold air conditioning. You will hear airplanes landing and launching and they will shake the building. The room was okay for what I needed, a cheap place to stay for a quick business trip. The remodel was done carelessly the paint on the wall, doors, baseboards looks sloppy and makes the room feel ugh.
The floor in our Room was not clean our feet were dirty just from walking in the bathroom. No toiletries at all except for a tiny soap. Don’t expect any luxury it’s very basic. Not very helpful staff
This business is located precisely behind a tarmac. The room had a roach walking on the wall, and I saw rats running through the parking lot.The snacks in the vending machines were mid. The staff was nice, even waived good bye as I left.
Stayed 1 night in Aug 2026
Verified review
8/10 Good
David
12 Jul 2026
Liked: Staff & service
Everything was fine. It’s about what you would expect at the price in downtown San Diego. The staff was helpful.
Cold AC that drowned out the very loud planes overhead reallyhelped. Room was clean and beds were comfortable.
However, the area does not feel safe and will probably not stay here again. Not because of the way I was treated or the room condition but more because of the surroundings and having children at this location.
Staff was very helpful and although extremely busy they were very attentive
Stayed 1 night in May 2026
Verified review
10/10 Excellent
Jesus
5 Jul 2026
Liked: Amenities
Small tight parking lot. Tricky, only one way to enter from PCH hwy. However great location to airport or harbor. Walking distance to fireworks show on 4th of July. Keep in mind there is a lot of noise from airplanes and the train.
Enjoyed our one night stay. Good location, excellent value for money for a San Diego visit. So long as you don't mind the constant air traffic overhead:)
Good place for spending the night 5 minutes away from the airport. Accommodations are basic but clean and comfortable. Bring earplugs; planes pass by just above your room before landing.
The room was very clean, & spacious, the location was very good, with in walking distance to little Italy & the Midway Museum & most of anything else we wanted to see.
The coffee in the morning was very good. I would stay here again.