An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Mission Bay Hotels, San Diego

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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,496 reviews)
"We have stayed here before, good location, clean rooms, great staff."
United States
Lance
The price is NZ$694
includes taxes & fees
6 July - 7 July
San Diego Mission Bay Resort

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,661 reviews)
"This was a beautiful place to stay. Right by the water, staff was very helpful, restaurant's were good"
United States
Myesha
The price is NZ$654
includes taxes & fees
28 June - 29 June
Paradise Point Resort & Spa

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,632 reviews)
"Amazing place!"
United States
Yesenia
The price is NZ$654
includes taxes & fees
28 June - 29 June
Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,374 reviews)
"Beautiful property, very helpful staff, great location"
United States
Jamie
The price is NZ$571
includes taxes & fees
29 June - 30 June
The Dana on Mission Bay

Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4 km from Mission Bay
8.4 out of 10, Very good, (1,022 reviews)
"great stay"
United States
David
The price is NZ$238
includes taxes & fees
30 June - 1 July
Crowne Plaza San Diego - Mission Valley by IHG

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,529 reviews)
"Great location and shuttle service to and from the airport."
Canada
Malinda
The price is NZ$409
includes taxes & fees
1 July - 2 July
Sheraton San Diego Resort

Lafayette Hotel & Club

Lafayette Hotel & Club
4.0 star property
8.1 km from Mission Bay
9.4 out of 10, Exceptional, (1,741 reviews)
"Beautiful hotel"
United States
Cuauhtemoc
The price is NZ$501
includes taxes & fees
29 June - 30 June
Lafayette Hotel & Club

Valli Hi Motel

Valli Hi Motel
2.5 star property
28.8 km from Mission Bay
8.4 out of 10, Very good, (1,021 reviews)
"Great place to stay."
United States
Allan
The price is NZ$170
includes taxes & fees
29 June - 30 June
Valli Hi Motel

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
28.6 km from Mission Bay
8.8 out of 10, Excellent, (1,309 reviews)
"The breakfast was great, the staff was helpful, and the room was clean and spacious!"
United States
Christopher
The price is NZ$242
includes taxes & fees
12 July - 13 July
Best Western Americana Inn

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,714 reviews)
"Good location, clean room and nice staff. A great place to stay."
United States
Patricia
The price is NZ$343
includes taxes & fees
1 July - 2 July
Hampton Inn & Suites San Diego Airport Liberty Station

Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
4.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,086 reviews)
"Staff was so great nice rooms really great stay"
United States
Amelia
The price is NZ$290
includes taxes & fees
30 June - 1 July
Holiday Inn Express San Diego Airport - Old Town by IHG

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,200 reviews)
"Clean room, staff was very helpful, parking was easy and accessible!"
United States
Hector
The price is NZ$259
includes taxes & fees
1 July - 2 July
Wyndham Garden San Diego Near SeaWorld

La Jolla Shores Hotel

La Jolla Shores Hotel
3.0 star property
9.3 km from Mission Bay
8.8 out of 10, Excellent, (1,357 reviews)
"Nice beach view, helpful staff, clean property."
United States
Edgardo
The price is NZ$679
includes taxes & fees
30 June - 1 July
La Jolla Shores Hotel

Embassy Suites by Hilton San Diego Bay Downtown

Embassy Suites by Hilton San Diego Bay Downtown
4.0 star property
8.7 km from Mission Bay
9.0 out of 10, Wonderful, (1,837 reviews)
"We really enjoyed staying here, breakfast was good, staff was great, really clean, we recommend this hotel"
United States
Francesca Elisa
The price is NZ$433
includes taxes & fees
17 July - 18 July
Embassy Suites by Hilton San Diego Bay Downtown

La Quinta Inn by Wyndham San Diego - Miramar

La Quinta Inn by Wyndham San Diego - Miramar
3.0 star property
22.2 km from Mission Bay
8.0 out of 10, Very good, (1,321 reviews)
"Clean rooms, helpful staff and great breakfast."
United States
isabel
The price is NZ$255
includes taxes & fees
5 July - 6 July
La Quinta Inn by Wyndham San Diego - Miramar

Courtyard by Marriott San Diego Airport/Liberty Station

Courtyard by Marriott San Diego Airport/Liberty Station
3.0 star property
5 km from Mission Bay
9.2 out of 10, Wonderful, (1,293 reviews)
"Was a lovely stay and it overlooks the water."
United States
Kara
The price is NZ$392
includes taxes & fees
30 June - 1 July
Courtyard by Marriott San Diego Airport/Liberty Station

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
8 km from Mission Bay
8.4 out of 10, Very good, (6,212 reviews)
"Great place to stay if visiting san diego recommend"
United States
Carlos
The price is NZ$388
includes taxes & fees
29 June - 30 June
Wyndham San Diego Bayside

Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
16.7 km from Mission Bay
9.2 out of 10, Wonderful, (3,891 reviews)
"Great stay"
United States
Cameron
The price is NZ$328
includes taxes & fees
30 June - 1 July
Best Western Plus Marina Gateway Hotel

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,471 reviews)
"Hotel is lovely mission style in keeping with the area. The location is very convenient to local attractions."
United States
Toni
The price is NZ$317
includes taxes & fees
30 June - 1 July
Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.2 out of 10, Wonderful, (1,882 reviews)
"Clean room, good breakfast, comfortable pool area, friendly staff."
United States
Robert
The price is NZ$335
includes taxes & fees
29 June - 30 June
Old Town Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Our guide on where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Mission Beach

If you're spending some time in Mission Beach, Mission Beach and Mission Bay are top sights worth seeing.

Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Ocean Beach and Dog Beach.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on our traveller data, San Diego Mission Bay Resort is one of the top choices for your stay in Mission Bay. This resort offers a full-service spa and 2 restaurants. Other good options for your stay in the neighbourhood include Paradise Point Resort & Spa and The Dana on Mission Bay.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach and Hotel Circle are some popular places to visit in the area around Mission Bay. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.