What is Mission Bay like?

You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.

What's a favourite hotel to stay in Mission Bay?

Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina .

How many hotels should I expect to find in the Mission Bay area?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.

What is there to do around this San Diego neighbourhood?

Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighbourhood. Mission Beach, beach near Mission Bay Park and beach near Mission Bay are just a few of the places to visit in and around Mission Bay. When you're sightseeing in San Diego, Bahia Point Beach and Bay City Brewing Co. are also worth a stop.

Mission Bay Hotels, San Diego

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Dates

May 2026

7

June 2026

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Our top choices for Mission Bay hotels

Outdoor pool, open 7:00 AM to 10:00 PM, pool cabanas (surcharge)

San Diego Mission Bay Resort

Mission Bay

Valerie

includes taxes & fees

10 May - 11 May

5 outdoor pools, a heated pool, pool umbrellas, pool loungers

Paradise Point Resort & Spa

Mission Bay

Rolando

includes taxes & fees

25 May - 26 May

3 outdoor pools, pool cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Donald

includes taxes & fees

10 May - 11 May

2 outdoor pools, a heated pool, pool loungers

The Dana on Mission Bay

Mission Bay

Brandon

includes taxes & fees

10 May - 11 May

Studio Suite, 1 King Bed with Sofa bed, Balcony | View from room

Sheraton San Diego Resort

6 km from Mission Bay

Gregory

includes taxes & fees

25 May - 26 May

Breakfast, lunch, dinner served; Mediterranean cuisine

Bahia Resort Hotel

Central Mission Beach, 2.3 km from Mission Bay

Megan

includes taxes & fees

19 May - 20 May

Standard Room, 2 Queen Beds, Non Smoking, Microwave

Best Western Yacht Harbor Hotel

5.6 km from Mission Bay

Jeffrey

includes taxes & fees

1 June - 2 June

Down duvets, Select Comfort beds, desk, laptop workspace

Ramada by Wyndham San Diego Poway Miramar

24.7 km from Mission Bay

Ruffa Regina

includes taxes & fees

10 May - 11 May

Pleasant Inn

8 km from Mission Bay

Laurent

includes taxes & fees

14 May - 15 May

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town San Diego, 3.1 km from Mission Bay

Dennis

includes taxes & fees

10 May - 11 May

Wyndham Garden San Diego Near SeaWorld

2.6 km from Mission Bay

Andrea

includes taxes & fees

14 May - 15 May

Holiday Inn Express San Diego Airport - Old Town by IHG

4.8 km from Mission Bay

Joey L

includes taxes & fees

10 May - 11 May

Bay Club Hotel & Marina

6.8 km from Mission Bay

Lawrence

includes taxes & fees

11 May - 12 May

Embassy Suites by Hilton San Diego Bay Downtown

8.7 km from Mission Bay

Arthur

includes taxes & fees

25 May - 26 May

Old Town Inn

3.5 km from Mission Bay

Rachel

includes taxes & fees

10 May - 11 May

Best Western Plus Hacienda Hotel Old Town

Old Town San Diego, 3.7 km from Mission Bay

Javier

includes taxes & fees

11 May - 12 May

3 restaurants, breakfast, lunch, dinner served; Regional cuisine

Wyndham San Diego Bayside

8 km from Mission Bay

Regina

includes taxes & fees

10 May - 11 May

Best Western San Diego/Miramar Hotel

16.1 km from Mission Bay

Mercy

includes taxes & fees

25 May - 26 May

The Encinitan Hotel & Suites

30.9 km from Mission Bay

Valeria

includes taxes & fees

14 May - 15 May

Courtyard by Marriott San Diego Downtown Little Italy

Little Italy, 8.1 km from Mission Bay

Cristian

includes taxes & fees

27 May - 28 May

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Our guide on where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

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Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

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Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

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Gaslamp Quarter

The historic heart of San Diego has a fascinating history, and today is a thriving hub for food, retail and entertainment.

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Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Dog Beach and Ocean Beach.

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Top Mission Bay Hotel Reviews

The Sofia Hotel

10/10 Excellent

"Nice hotel within walking distance of the pier. They were very accommodating with allowing for a late checkout due to our flight delays."

Bay Club Hotel & Marina

10/10 Excellent

"We stayed for two nights... everything was great. We chose the Marina side with a corner unit... it was fabulous. It is so central to all of the locations that we wanted to visit.... PLNU, Sunset Cliffs, Little Italy, Old Town and so much more. It was also just nice to walk around the marina/bay area and pick up some coffee on the way. We will definitely stay here again."

Days Inn by Wyndham San Diego Hotel Circle

8/10 Good

"My room was great for what you pay for, other than having some uninvited guest i.e. spiders & some roaches. Staff always had the room freshened up, bed was made, trash was always cleaned out. Location was perfect too, I felt like this was perfectly in the middle of everything I wanted to go see. I would definitely stay again but maybe on another floor / room."

San Diego Mission Bay Resort

10/10 Excellent

"Everything was great, the staff was super friendly and super helpful, the room was clean and spacious with my family of 5. THE ONLY thing we had a problem with was the hours of the two other bars/restaurant. Granted we went durn the week but the resort was still busy. The pool side bar was only open on Sunday and Plaza del sol was only open because there was an event going on. Plus the food menu was different at all three. Other than that everything else was amazing. "

Hotel del Coronado, Curio Collection by Hilton

8/10 Good

"The room was clean and recently updated. The ocean view was lovely and did not disappoint. The property was very clean and well-maintained. A few negatives we did notice: Being located on a balcony room did have some noise that reached us from the restaurants and bars below. We did get a few ants in our room. As for parking - the fee to self park or valet are extremely ridiculous. You should be aware that it's a very high fee of $90-100/per day. "

Mission Bay Hotels, San Diego

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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

Paradise Point Resort & Spa

Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

Sheraton San Diego Resort

Bahia Resort Hotel

Best Western Yacht Harbor Hotel

Ramada by Wyndham San Diego Poway Miramar

Pleasant Inn

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Wyndham Garden San Diego Near SeaWorld

Holiday Inn Express San Diego Airport - Old Town by IHG

Bay Club Hotel & Marina

Embassy Suites by Hilton San Diego Bay Downtown

Old Town Inn

Best Western Plus Hacienda Hotel Old Town

Wyndham San Diego Bayside

Best Western San Diego/Miramar Hotel

The Encinitan Hotel & Suites

Courtyard by Marriott San Diego Downtown Little Italy

Our guide on where to stay in Mission Bay

Downtown San Diego

Pacific Beach

Mission Beach

Gaslamp Quarter

Ocean Beach

Top Mission Bay Hotel Reviews

The Sofia Hotel

Frequently asked questions