A coastal town with white buildings, a windmill, and a beach with people.

Boutique Hotels & Resorts in Mykonos from NZ$172

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Mykonos Boutique Hotels

Tonight
5 Oct - 6 Oct
Tomorrow
6 Oct - 7 Oct
This weekend
9 Oct - 11 Oct
Next weekend
16 Oct - 18 Oct

Our top choices for Mykonos boutique hotels

An outdoor dining area with tables and chairs, a tree, and a stone wall.
A narrow white-walled alley with stone flooring, a bench, and a planter with flowers.
A white building with a sign for 'Kalita Restaurant' and 'Fresh Boutique Hotel'.
A buffet setup with a long table covered in white cloth, surrounded by various food items and beverages.

1. Fresh Boutique Hotel

Fresh Boutique Hotel
Mykonos
United States
Fatmir
NZ$172
includes taxes & fees
6 Oct - 7 Oct
Fresh Boutique Hotel
A swimming pool with a clear view of the water, a white poolside area, and two empty glasses on a white surface.
A modern building with a stone facade and a clear sky.
A spacious bedroom with a large bed, a bathroom with a large mirror, and a view of the sea.
A waterfront resort with outdoor seating, a pool, and boats in the background.

2. Nissaki Boutique Hotel

Nissaki Boutique Hotel
Mykonos
United States
Melissa
NZ$492
includes taxes & fees
17 Oct - 18 Oct
Nissaki Boutique Hotel
A modern resort with a pool, two-story buildings, and palm trees.
A modern resort with multiple white buildings, a pool, and palm trees.
A modern building with white walls and a flat roof, surrounded by palm trees and other vegetation.
A bedroom with a bed, a desk, a TV, and a view of the sea.

3. Adama Mykonos Boutique Hotel

Adama Mykonos Boutique Hotel
Mykonos
Canada
Kurt
NZ$197
includes taxes & fees
6 Oct - 7 Oct
Adama Mykonos Boutique Hotel
A poolside dining area with a table set for two, overlooking a pool with a view of the sea and distant hills.
A rooftop lounge area with sun loungers, a large tree, and a view of the sea.
A coastal view with a clear blue sea, a sandy beach, and a distant hill with buildings.
A hotel room with a large bed, a desk, a chair, and a TV. There are large windows with a view of the sea.

4. Grace Mykonos

Grace Mykonos
Mykonos
Canada
Qing
Grace Mykonos
A pool area with lounge chairs and umbrellas, surrounded by palm trees and a white building.
A spa area with a wooden bench, a person attending to another on the bench, and a white canopy structure.
The exterior of Axel Beach Mykonos with a modern design, featuring large glass doors and a minimalist facade.
A modern interior with a white bench, wooden beams, a large mirror, and a wicker basket.

5. Axel Beach Mykonos - Adults Only

Axel Beach Mykonos - Adults Only
Mykonos
United States
Bryan
NZ$231
includes taxes & fees
28 Oct - 29 Oct
Axel Beach Mykonos - Adults Only
A person relaxing by a pool with a view of the sea and a mountain in the background.
A breakfast table with a view of the sea, a plant, and various breakfast items.
An aerial view of a beach with rows of wooden sun loungers and thatched umbrellas.
A modern hotel room with a large bed, a bedside table, a vanity with a mirror, and a television.

6. Archipelagos Hotel

Archipelagos Hotel
Mykonos
United States
Kinga Monika
NZ$274
includes taxes & fees
6 Oct - 7 Oct
Archipelagos Hotel
A bedroom with a large window overlooking a coastal view, a wooden table with a bottle and glasses, and a hanging basket.
A terrace with a stone wall, wooden furniture, a table with a bottle and glasses, and a view of the sea and distant land.
A wooden dining table with a woven basket centerpiece, rustic candle holders, and a view of palm trees through a large window.
A rustic kitchen with wooden shelves, black pots, a bowl of grapes, and a lit candle.

7. Amyth of Mykonos Agios Stefanos

Amyth of Mykonos Agios Stefanos
Mykonos
United Kingdom
Nica
NZ$400
includes taxes & fees
11 Oct - 12 Oct
Amyth of Mykonos Agios Stefanos
A sunlit outdoor seating area with a view of the sea, wooden beams, and a door leading to an interior space.
A corridor with wooden beams and white curtains, leading to a room with a stone wall and a view of the sky.
A woman sitting by a pool with a view of the sea and a town in the background.
A bedroom with a large bed, white curtains, a view of the sea, a tall vase, and a wooden stool.

8. Boheme Mykonos Town - Small Luxury Hotels of the World

Boheme Mykonos Town - Small Luxury Hotels of the World
Mykonos
United States
Sebastien
NZ$625
includes taxes & fees
21 Oct - 22 Oct
Boheme Mykonos Town - Small Luxury Hotels of the World
Dining
A bedroom with a large bed, a bedside table, a hanging light, and a wardrobe.
A modern white building with a symmetrical facade, multiple windows, and a central entrance.
A modern outdoor patio with a wooden pergola, a pool, and a dining area with a view of the landscape.

9. Koukoumi Vegan Boutique Hotel

Koukoumi Vegan Boutique Hotel
Mykonos
United Kingdom
Stuart
NZ$401
includes taxes & fees
20 Oct - 21 Oct
Koukoumi Vegan Boutique Hotel
A spa area with a blue pool, stone walls, and candles.
A wedding aisle with white floral arches and chairs, leading to a view of the sea.
An outdoor wedding setup with a view of the sea, featuring a white table with clear chairs, floral arrangements, and a canopy structure.
A modern bedroom with a view of the ocean, a white sofa with cushions, a small round table, and a marble wall.

10. Lovia Mykonos

Lovia Mykonos
Mykonos
Mexico
Allan
NZ$945
includes taxes & fees
11 Oct - 12 Oct
Lovia Mykonos
View all properties

Top Mykonos Hotel Reviews

Hermes Mykonos Hotel

Hermes Mykonos Hotel

10/10 Excellent
"The Hôtel is beautiful, the staff always handy ! They got nice food too, English or French they may communicante ! I recommend !"
christine 3-night trip
Posted 1 hour ago
Hermes Mykonos Hotel
Myconian Ambassador Hotel Relais & Chateaux

Myconian Ambassador Hotel Relais & Chateaux

10/10 Excellent
"From the moment you approach the reort the staff made you feel welcomed and assisted in a friendly and professional manner. check is was simple and quick. The food was top notch! the breakfast was fresh and delightful. My cousin and I went for relaxation and the Mykonian was the exact place for us. We booked the full/complete package for a spa day that was so amazing I can not describe. But, ladies and men, if you truely want to experience a meditateraian spa day - this resort has the best personel and spa to surpass your expectations. My cousin and I experienced the best and ........ her experience was as good as mine. Some spas with different staff experience slightly different experiences - The Myconian staff follow the the structur4e and policy that no matter who is maseus, the experience will alwasy be the same to the letter. The value of what we paid was far beyond my expectations. If those ladies were here, I would book a spa at least once a month. Thank you everyone ath the Mykonian for a wonderful relaxing stay. Oh, yes, the pool the view the location ...... there is not one thing I would change."
Anne Marie 4-night trip
Posted 1 hour ago
Myconian Ambassador Hotel Relais & Chateaux
Hotel Alkyon

Hotel Alkyon

10/10 Excellent
"Location !!! Beautiful view !!!"
Heidy 1-night trip
Posted 4 days ago
Hotel Alkyon
Semeli Hotel

Semeli Hotel

10/10 Excellent
"Staff and rooms are lovely and the pool area is great. Spa facilities are basic but good service. Location excellent, all the features of the high end hotels but only a five minute walk from main town"
John 4-night trip
Posted 5 days ago
Semeli Hotel

Frequently asked questions

Searching for a unique accommodation option for your visit to Mykonos?
If you want to find a small hotel with outstanding service, a personal feel, and good ambiance, a boutique hotel may be exactly what you want. Select from 16 boutique accommodation options in Mykonos to find a property that represents the local spirit of this area.
What's the best boutique accommodation in Mykonos?
Nissaki Boutique Hotel is a favourite hotel with our travellers looking for stylish accommodation, and features 44 guestrooms, a private beach and a poolside restaurant. Kove Hotel & Spa Mykonos - MGallery Collection and Axel Beach Mykonos - Adults Only are two other options for a boutique stay.
How many boutique hotels will I find in Mykonos?
Expedia has 16 boutique hotels in Mykonos.
What's there to see and do in Mykonos?
Visitors speak positively about this destination's breathtaking beach views, fantastic nightlife and beautiful island views. Activities and attractions to experience around Mykonos include Mykonos New Port, Aegean Maritime Museum and Matoyianni Street. You might also want to consider exploring Mykonos Town Hall, Church of Panagia Paraportiani and Fabrica Square while you're here.
What kind of weather should I plan for when I travel to Mykonos?
Understanding the weather in Mykonos is important when planning your trip. The hottest months are usually August and July, with an average temperature of 24°C, while the coldest months are January and February, with an average of 13°C. Average annual precipitation for Mykonos is 384 mm.
What's the best way to get to my boutique hotel in Mykonos?
You have a few options for travelling to and around Mykonos. The nearest major airport is Mykonos (JMK-Mykonos Island National), which is located 1.3 mi (2 km) from the heart of the city, but Ermoupolis (JSY-Syros Island National) may also be an option. If you'd like to explore around the area, you may want to rent a car for your trip.

Explore a world of travel with Expedia